User profiles for Ashok Ragavendran
Ashok RagavendranBrown University Verified email at mgh.harvard.edu Cited by 2164 |
[PDF][PDF] Low incidence of off-target mutations in individual CRISPR-Cas9 and TALEN targeted human stem cell clones detected by whole-genome sequencing
Genome editing has attracted wide interest for the generation of cellular models of disease
using human pluripotent stem cells and other cell types. CRISPR-Cas systems and TALENs …
using human pluripotent stem cells and other cell types. CRISPR-Cas systems and TALENs …
CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors
…, P Manavalan, A Ragavendran… - Proceedings of the …, 2014 - National Acad Sciences
Truncating mutations of chromodomain helicase DNA-binding protein 8 (CHD8), and of
many other genes with diverse functions, are strong-effect risk factors for autism spectrum …
many other genes with diverse functions, are strong-effect risk factors for autism spectrum …
[PDF][PDF] Dissecting the causal mechanism of X-linked dystonia-parkinsonism by integrating genome and transcriptome assembly
…, C Hanscom, C Antolik, M Dy, A Ragavendran… - Cell, 2018 - cell.com
X-linked Dystonia-Parkinsonism (XDP) is a Mendelian neurodegenerative disease that is
endemic to the Philippines and is associated with a founder haplotype. We integrated multiple …
endemic to the Philippines and is associated with a founder haplotype. We integrated multiple …
[HTML][HTML] Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome
Background Structural variation (SV) influences genome organization and contributes to
human disease. However, the complete mutational spectrum of SV has not been routinely …
human disease. However, the complete mutational spectrum of SV has not been routinely …
[PDF][PDF] Transcriptional consequences of 16p11. 2 deletion and duplication in mouse cortex and multiplex autism families
I Blumenthal, A Ragavendran, S Erdin, L Klei… - The American Journal of …, 2014 - cell.com
Reciprocal copy-number variation (CNV) of a 593 kb region of 16p11.2 is a common
genetic cause of autism spectrum disorder (ASD), yet it is not completely penetrant and can …
genetic cause of autism spectrum disorder (ASD), yet it is not completely penetrant and can …
Engineering microdeletions and microduplications by targeting segmental duplications with CRISPR
DJC Tai, A Ragavendran, P Manavalan… - Nature …, 2016 - nature.com
Recurrent, reciprocal genomic disorders resulting from non-allelic homologous recombination
(NAHR) between near-identical segmental duplications (SDs) are a major cause of …
(NAHR) between near-identical segmental duplications (SDs) are a major cause of …
[HTML][HTML] A deep learning approach to identify gene targets of a therapeutic for human splicing disorders
Pre-mRNA splicing is a key controller of human gene expression. Disturbances in splicing
due to mutation lead to dysregulated protein expression and contribute to a substantial …
due to mutation lead to dysregulated protein expression and contribute to a substantial …
Htt CAG repeat expansion confers pleiotropic gains of mutant huntingtin function in chromatin regulation
…, P Manavalan, A Ragavendran… - Human molecular …, 2015 - academic.oup.com
The CAG repeat expansion in the Huntington's disease gene HTT extends a polyglutamine
tract in mutant huntingtin that enhances its ability to facilitate polycomb repressive complex 2 (…
tract in mutant huntingtin that enhances its ability to facilitate polycomb repressive complex 2 (…
[PDF][PDF] Tissue-and cell-type-specific molecular and functional signatures of 16p11. 2 reciprocal genomic disorder across mouse brain and human neuronal models
Chromosome 16p11.2 reciprocal genomic disorder, resulting from recurrent copy-number
variants (CNVs), involves intellectual disability, autism spectrum disorder (ASD), and …
variants (CNVs), involves intellectual disability, autism spectrum disorder (ASD), and …
How do consumers deal with stoichiometric constraints? Lessons from functional genomics using Daphnia pulex
PD Jeyasingh, A Ragavendran, S Paland… - Molecular …, 2011 - Wiley Online Library
Disaccord between the supply and demand of energy (carbon, C) and certain material
elements (eg phosphorus, P) across trophic levels is common in most ecosystems and impacts …
elements (eg phosphorus, P) across trophic levels is common in most ecosystems and impacts …