User profiles for Jason Vander A. Heiden

Jason Anthony Vander Heiden

Genentech
Verified email at gene.com
Cited by 4126

Tumor-infiltrating immune repertoires captured by single-cell barcoding in emulsion

…, CR Clouser, D Koppstein, D Sok, JVA Heiden… - BioRxiv, 2017 - biorxiv.org
Tumor-infiltrating lymphocytes (TILs) are critical to anti-cancer immune responses, but their
diverse phenotypes and functions remain poorly understood and challenging to study. We …

Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data

NT Gupta, JA Vander Heiden, M Uduman… - …, 2015 - academic.oup.com
Advances in high-throughput sequencing technologies now allow for large-scale characterization
of B cell immunoglobulin (Ig) repertoires. The high germline and somatic diversity of …

pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires

JA Vander Heiden, G Yaari, M Uduman… - …, 2014 - academic.oup.com
Driven by dramatic technological improvements, large-scale characterization of lymphocyte
receptor repertoires via high-throughput sequencing is now feasible. Although promising, …

B cells populating the multiple sclerosis brain mature in the draining cervical lymph nodes

JNH Stern, G Yaari, JA Vander Heiden… - Science translational …, 2014 - science.org
Multiple sclerosis (MS) is an inflammatory disease of the central nervous system (CNS)
characterized by autoimmune-mediated demyelination and neurodegeneration. The CNS of …

In vivo partial reprogramming alters age-associated molecular changes during physiological aging in mice

…, PG Garcia, M Pawlak, JA Vander Heiden… - Nature Aging, 2022 - nature.com
Partial reprogramming by expression of reprogramming factors (Oct4, Sox2, Klf4 and c-Myc)
for short periods of time restores a youthful epigenetic signature to aging cells and extends …

[HTML][HTML] Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data

G Yaari, JA Vander Heiden, M Uduman… - Frontiers in …, 2013 - frontiersin.org
Analyses of somatic hypermutation (SHM) patterns in B cell immunoglobulin (Ig) sequences
contribute to our basic understanding of adaptive immunity, and have broad applications not …

[PDF][PDF] Salmonella infection drives promiscuous B cell activation followed by extrafollicular affinity maturation

R Di Niro, SJ Lee, JA Vander Heiden, RA Elsner… - Immunity, 2015 - cell.com
The B cell response to Salmonella typhimurium (STm) occurs massively at extrafollicular
sites, without notable germinal centers (GCs). Little is known in terms of its specificity. To …

High-resolution antibody dynamics of vaccine-induced immune responses

…, M Uduman, JA Vander Heiden… - Proceedings of the …, 2014 - National Acad Sciences
The adaptive immune system confers protection by generating a diverse repertoire of antibody
receptors that are rapidly expanded and contracted in response to specific targets. Next-…

Interleukin-10 from CD4+ follicular regulatory T cells promotes the germinal center response

…, RA Amezquita, JS Weinstein, JA Vander Heiden… - Science …, 2017 - science.org
CD4 + follicular regulatory T (T fr ) cells suppress B cell responses through modulation of
follicular helper T (T fh ) cells and germinal center (GC) development. We found that T fr cells …

TGFβ2 and TGFβ3 isoforms drive fibrotic disease pathogenesis

…, KH Sun, Z Modrusan, JA Vander Heiden… - Science translational …, 2021 - science.org
Transforming growth factor–β (TGFβ) is a key driver of fibrogenesis. Three TGFβ isoforms (TGFβ1,
TGFβ2, and TGFβ3) in mammals have distinct functions in embryonic development; …