User profiles for Katherine S. Pollard
Katherine S PollardDirector, Gladstone Institute of Data Science & Biotechnology / UCSF Verified email at gladstone.ucsf.edu Cited by 46619 |
Detection of nonneutral substitution rates on mammalian phylogenies
Methods for detecting nucleotide substitution rates that are faster or slower than expected
under neutral drift are widely used to identify candidate functional elements in genomic …
under neutral drift are widely used to identify candidate functional elements in genomic …
[HTML][HTML] A communal catalogue reveals Earth's multiscale microbial diversity
Our growing awareness of the microbial world’s importance and diversity contrasts starkly
with our limited understanding of its fundamental structure. Despite recent advances in DNA …
with our limited understanding of its fundamental structure. Despite recent advances in DNA …
[HTML][HTML] A unified catalog of 204,938 reference genomes from the human gut microbiome
Comprehensive, high-quality reference genomes are required for functional characterization
and taxonomic assignment of the human gut microbiota. We present the Unified Human …
and taxonomic assignment of the human gut microbiota. We present the Unified Human …
[PDF][PDF] Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy
…, B Joehnk, K Walcott, A Sil, C Langelier, KS Pollard… - Cell, 2021 - cell.com
The December 2019 outbreak of a novel respiratory virus, SARS-CoV-2, has become an
ongoing global pandemic due in part to the challenge of identifying symptomatic, asymptomatic, …
ongoing global pandemic due in part to the challenge of identifying symptomatic, asymptomatic, …
[HTML][HTML] A high-resolution map of human evolutionary constraint using 29 mammals
The comparison of related genomes has emerged as a powerful lens for genome interpretation.
Here we report the sequencing and comparative analysis of 29 eutherian genomes. We …
Here we report the sequencing and comparative analysis of 29 eutherian genomes. We …
An RNA gene expressed during cortical development evolved rapidly in humans
The developmental and evolutionary mechanisms behind the emergence of human-specific
brain features remain largely unknown. However, the recent ability to compare our genome …
brain features remain largely unknown. However, the recent ability to compare our genome …
American gut: an open platform for citizen science microbiome research
…, TT Nguyen, S Peddada, P Pevzner, KS Pollard… - Msystems, 2018 - Am Soc Microbiol
Although much work has linked the human microbiome to specific phenotypes and lifestyle
variables, data from different projects have been challenging to integrate and the extent of …
variables, data from different projects have been challenging to integrate and the extent of …
[HTML][HTML] Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage
Heart development is exquisitely sensitive to the precise temporal regulation of thousands
of genes that govern developmental decisions during differentiation. However, we currently …
of genes that govern developmental decisions during differentiation. However, we currently …
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates
…, R Swofford, KS Pollard… - Proceedings of the …, 2020 - National Acad Sciences
The novel coronavirus severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the
cause of COVID-19. The main receptor of SARS-CoV-2, angiotensin I converting enzyme 2 …
cause of COVID-19. The main receptor of SARS-CoV-2, angiotensin I converting enzyme 2 …
[HTML][HTML] New insights from uncultivated genomes of the global human gut microbiome
The genome sequences of many species of the human gut microbiome remain unknown,
largely owing to challenges in cultivating microorganisms under laboratory conditions. Here …
largely owing to challenges in cultivating microorganisms under laboratory conditions. Here …