[PDF][PDF] The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations

…, S Sivaganesan, M Medvedovic, J Meller, RJ Koch… - Cell systems, 2018 - cell.com
The Library of Integrated Network-Based Cellular Signatures (LINCS) is an NIH Common
Fund program that catalogs how human cells globally respond to chemical, genetic, and …

[HTML][HTML] A mechanistic pan-cancer pathway model informed by multi-omics data interprets stochastic cell fate responses to drugs and mitogens

…, AM Barrette, AD Stern, RJ Koch… - PLoS computational …, 2018 - journals.plos.org
Most cancer cells harbor multiple drivers whose epistasis and interactions with expression
context clouds drug and drug combination sensitivity prediction. We constructed a …

[HTML][HTML] Effects of subthalamic nucleus lesions and stimulation upon corticostriatal afferents in the 6-hydroxydopamine-lesioned rat

RH Walker, C Moore, G Davies, LB Dirling, RJ Koch… - PloS one, 2012 - journals.plos.org
Abnormalities of striatal glutamate neurotransmission may play a role in the pathophysiology
of Parkinson's disease and may respond to neurosurgical interventions, specifically …

[HTML][HTML] Selective brain penetrable Nurr1 transactivator for treating Parkinson's disease

J Wang, W Bi, W Zhao, M Varghese, RJ Koch… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Parkinson's disease (PD) is one of the most common movement disorders, and currently there
is no effective treatment that can slow disease progression. Preserving and enhancing DA …

[HTML][HTML] Validating antibodies for quantitative western blot measurements with microwestern array

RJ Koch, AM Barrette, AD Stern, B Hu… - Scientific Reports, 2018 - nature.com
Fluorescence-based western blots are quantitative in principal, but require determining
linear range for each antibody. Here, we use microwestern array to rapidly evaluate suitable …

CD4+ T cells from IRF-1-deficient mice exhibit altered patterns of cytokine expression and cell subset homeostasis.

…, JA Phillips, CA Stillman, RJ Koch… - … (Baltimore, Md.: 1950 …, 1997 - journals.aai.org
Interferon regulatory factor-1 (IRF-1) is a member of a family of transcription factors that regulate
an array of genes involved in cell growth, differentiation, and death. Analysis of cytokine …

Effects of subthalamic nucleus lesions and stimulation upon glutamate levels in the dopamine-depleted rat striatum

RH Walker, RJ Koch, JE Sweeney, C Moore… - …, 2009 - journals.lww.com
It is not known how neurosurgical interventions benefit patients with Parkinson's disease.
We compared the effects of electrical stimulation and electrolytic lesions of the subthalamic …

Interleukin-6 production by murine B cells and B cell lines

MV Hobbs, RJ McEvilly, RJ Koch, GJ Cardenas… - Cellular …, 1991 - Elsevier
We have analyzed interleukin (IL)-6 gene transcription and IL-6 secretion by murine B cells
in vitro. Mitogenic doses of lipopolysaccharide (LPS) or LPS in combination with F(ab′) 2 …

Subthalamic nucleus stimulation and lesioning have distinct state‐dependent effects upon striatal dopamine metabolism

RH Walker, RJ Koch, C Moore, CK Meshul - Synapse, 2009 - Wiley Online Library
The mechanism by which deep brain stimulation (DBS) of the subthalamic nucleus (STN)
achieves its effects in Parkinson's disease (PD) is not known. In animal models of PD, …

Effects of zona incerta lesions on striatal neurochemistry and behavioral asymmetry in 6‐hydroxydopamine‐lesioned rats

RH Walker, G Davies, RJ Koch… - Journal of …, 2010 - Wiley Online Library
Abstract Analysis of optimal sites for neurosurgical interventions in patients with Parkinson's
disease (PD) suggests that significant clinical benefits may be achieved by involvement of …