User profiles for Sergey Stolyar
Sergey Stolyar(Stoliar)Senior Research Scientist, Institute for Systems Biology, Seattle WA Verified email at systemsbiology.org Cited by 3152 |
Metabolic modeling of a mutualistic microbial community
S Stolyar, S Van Dien, KL Hillesland… - Molecular systems …, 2007 - embopress.org
The rate of production of methane in many environments depends upon mutualistic interactions
between sulfate‐reducing bacteria and methanogens. To enhance our understanding of …
between sulfate‐reducing bacteria and methanogens. To enhance our understanding of …
Methylophilaceae link methanol oxidation to denitrification in freshwater lake sediment as suggested by stable isotope probing and pure culture analysis
…, T Wang, M Hackett, SM Stolyar… - Environmental …, 2009 - Wiley Online Library
In this work we assessed the potential for the denitrification linked to methanol consumption
in a microbial community inhabiting the top layer of the sediment of a pristine lake, Lake …
in a microbial community inhabiting the top layer of the sediment of a pristine lake, Lake …
Experimental protein mixture for validating tandem mass spectral analysis
Several methods have been used to identify peptides that correspond to tandem mass spectra.
In this work, we describe a data set of low energy tandem mass spectra generated from a …
In this work, we describe a data set of low energy tandem mass spectra generated from a …
Transcriptome analysis of Escherichia coli using high‐density oligonucleotide probe arrays
Microarrays traditionally have been used to analyze the expression behavior of large
numbers of coding transcripts. Here we present a comprehensive approach for high‐throughput …
numbers of coding transcripts. Here we present a comprehensive approach for high‐throughput …
The Electron Transfer System of Syntrophically Grown Desulfovibrio vulgaris
Interspecies hydrogen transfer between organisms producing and consuming hydrogen
promotes the decomposition of organic matter in most anoxic environments. Although …
promotes the decomposition of organic matter in most anoxic environments. Although …
Multiplex Genome Editing by Natural Transformation (MuGENT) for Synthetic Biology in Vibrio natriegens
Vibrio natriegens has recently emerged as an alternative to Escherichia coli for molecular
biology and biotechnology, but low-efficiency genetic tools hamper its development. Here, we …
biology and biotechnology, but low-efficiency genetic tools hamper its development. Here, we …
[HTML][HTML] Complete genome sequences of six strains of the genus Methylobacterium
The complete and assembled genome sequences were determined for six strains of the
alphaproteobacterial genus Methylobacterium, chosen for their key adaptations to different …
alphaproteobacterial genus Methylobacterium, chosen for their key adaptations to different …
[HTML][HTML] Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC …
Genome-scale metabolic models have proven useful for answering fundamental questions
about metabolic capabilities of a variety of microorganisms, as well as informing their …
about metabolic capabilities of a variety of microorganisms, as well as informing their …
Functional responses of methanogenic archaea to syntrophic growth
…, EL Hendrickson, MP Joachimiak, S Stolyar… - The ISME …, 2012 - academic.oup.com
Methanococcus maripaludis grown syntrophically with Desulfovibrio vulgaris was compared
with M. maripaludis monocultures grown under hydrogen limitation using transcriptional, …
with M. maripaludis monocultures grown under hydrogen limitation using transcriptional, …
[HTML][HTML] Comparative genomics and functional analysis of rhamnose catabolic pathways and regulons in bacteria
L-rhamnose (L-Rha) is a deoxy-hexose sugar commonly found in nature. L-Rha catabolic
pathways were previously characterized in various bacteria including Escherichia coli. …
pathways were previously characterized in various bacteria including Escherichia coli. …