User profiles for Soumya Raychaudhuri

Soumya Raychaudhuri

Harvard Medical School; Brigham and Women's Hospital, Broad Institute
Verified email at broadinstitute.org
Cited by 78669

Fast, sensitive and accurate integration of single-cell data with Harmony

…, Y Baglaenko, M Brenner, P Loh, S Raychaudhuri - Nature …, 2019 - nature.com
The emerging diversity of single-cell RNA-seq datasets allows for the full transcriptional
characterization of cell types across a wide variety of biological and clinical conditions. However, …

Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis

S Raychaudhuri, C Sandor, EA Stahl, J Freudenberg… - Nature …, 2012 - nature.com
The genetic association of the major histocompatibility complex (MHC) to rheumatoid arthritis
risk has commonly been attributed to alleles in HLA-DRB1. However, debate persists …

Genetics of rheumatoid arthritis contributes to biology and drug discovery

…, L Klareskog, PK Gregersen, S Raychaudhuri… - Nature, 2014 - nature.com
A major challenge in human genetics is to devise a systematic strategy to integrate disease-associated
variants with diverse genomic and biological data sets to provide insight into …

Common variants at CD40 and other loci confer risk of rheumatoid arthritis

S Raychaudhuri, EF Remmers, AT Lee, R Hackett… - Nature …, 2008 - nature.com
To identify rheumatoid arthritis risk loci in European populations, we conducted a meta-analysis
of two published genome-wide association (GWA) studies totaling 3,393 cases and …

Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis

…, H Grallert, N Amin, G Wu, CJ Willer, S Raychaudhuri… - Nature …, 2010 - nature.com
By combining genome-wide association data from 8,130 individuals with type 2 diabetes (T2D)
and 38,987 controls of European descent and following up previously unidentified meta-…

Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci

EA Stahl, S Raychaudhuri, EF Remmers, G Xie… - Nature …, 2010 - nature.com
To identify new genetic risk factors for rheumatoid arthritis, we conducted a genome-wide
association study meta-analysis of 5,539 autoantibody-positive individuals with rheumatoid …

Host–microbe interactions have shaped the genetic architecture of inflammatory bowel disease

…, I Cleynen, E Theatre, SL Spain, S Raychaudhuri… - Nature, 2012 - nature.com
Crohn’s disease and ulcerative colitis, the two common forms of inflammatory bowel disease
(IBD), affect over 2.5 million people of European ancestry, with rising prevalence in other …

The landscape of somatic copy-number alteration across human cancers

…, CH Mermel, D Porter, G Wei, S Raychaudhuri… - Nature, 2010 - nature.com
A powerful way to discover key genes with causal roles in oncogenesis is to identify
genomic regions that undergo frequent alteration in human cancers. Here we present high-…

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

…, GW Montgomery, NJ Prescott, S Raychaudhuri… - Nature …, 2010 - nature.com
We undertook a meta-analysis of six Crohn's disease genome-wide association studies (GWAS)
comprising 6,333 affected individuals (cases) and 15,056 controls and followed up the …

Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index

…, MF Feitosa, Z Kutalik, M Mangino, S Raychaudhuri… - Nature …, 2010 - nature.com
Obesity is globally prevalent and highly heritable, but its underlying genetic factors remain
largely elusive. To identify genetic loci for obesity susceptibility, we examined associations …