User profiles for Susannah G Tringe

Susannah Tringe

Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory
Verified email at lbl.gov
Cited by 39141

Plant–microbiome interactions: from community assembly to plant health

P Trivedi, JE Leach, SG Tringe, T Sa… - Nature reviews …, 2020 - nature.com
Healthy plants host diverse but taxonomically structured communities of microorganisms, the
plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes …

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

…, G Djordjevic, N Aboushadi, R Sorek, SG Tringe… - Nature, 2007 - nature.com
From the standpoints of both basic research and biotechnology, there is considerable interest
in reaching a clearer understanding of the diversity of biological mechanisms employed …

[HTML][HTML] Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

…, J Jarett, AR Rivers, EA Eloe-Fadrosh, SG Tringe… - Nature …, 2017 - nature.com
We present two standards developed by the Genomic Standards Consortium (GSC) for
reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum …

Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

…, T Zhang, RI Mackie, LA Pennacchio, SG Tringe… - Science, 2011 - science.org
The paucity of enzymes that efficiently deconstruct plant polysaccharides represents a major
bottleneck for industrial-scale conversion of cellulosic biomass into biofuels. Cow rumen …

[HTML][HTML] A genomic catalog of Earth's microbiomes

…, EM Wood-Charlson, AP Arkin, SG Tringe… - Nature …, 2021 - nature.com
The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has
enabled insights into the ecology and evolution of environmental and host-associated …

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

…, S Malfatti, T Glavina del Rio, CD Jones, SG Tringe… - Science, 2015 - science.org
Immune systems distinguish “self” from “nonself” to maintain homeostasis and must differentially
gate access to allow colonization by potentially beneficial, nonpathogenic microbes. …

[HTML][HTML] Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy

…, A Sharrar, BC Thomas, M Hess, SG Tringe… - Nature …, 2018 - nature.com
Microbial communities are critical to ecosystem function. A key objective of metagenomic
studies is to analyse organism-specific metabolic pathways and reconstruct community …

[HTML][HTML] Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

…, DS Lundberg, TG Del Rio, SG Tringe… - Nature …, 2016 - nature.com
Bacteria living on and in leaves and roots influence many aspects of plant health, so the
extent of a plant’s genetic control over its microbiota is of great interest to crop breeders and …

Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species

…, A Visel, LP Partida‐Martinez, SG Tringe - New …, 2016 - Wiley Online Library
Desert plants are hypothesized to survive the environmental stress inherent to these regions
in part thanks to symbioses with microorganisms, and yet these microbial species, the …

A renaissance for the pioneering 16S rRNA gene

SG Tringe, P Hugenholtz - Current opinion in microbiology, 2008 - Elsevier
Culture-independent molecular surveys using the 16S rRNA gene have become a mainstay
for characterizing microbial community structure over the past quarter century. More recently …