User profiles for Susannah G Tringe
Susannah TringeEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory Verified email at lbl.gov Cited by 39141 |
Plant–microbiome interactions: from community assembly to plant health
Healthy plants host diverse but taxonomically structured communities of microorganisms, the
plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes …
plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes …
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
From the standpoints of both basic research and biotechnology, there is considerable interest
in reaching a clearer understanding of the diversity of biological mechanisms employed …
in reaching a clearer understanding of the diversity of biological mechanisms employed …
[HTML][HTML] Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
We present two standards developed by the Genomic Standards Consortium (GSC) for
reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum …
reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum …
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen
…, T Zhang, RI Mackie, LA Pennacchio, SG Tringe… - Science, 2011 - science.org
The paucity of enzymes that efficiently deconstruct plant polysaccharides represents a major
bottleneck for industrial-scale conversion of cellulosic biomass into biofuels. Cow rumen …
bottleneck for industrial-scale conversion of cellulosic biomass into biofuels. Cow rumen …
[HTML][HTML] A genomic catalog of Earth's microbiomes
The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has
enabled insights into the ecology and evolution of environmental and host-associated …
enabled insights into the ecology and evolution of environmental and host-associated …
Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa
Immune systems distinguish “self” from “nonself” to maintain homeostasis and must differentially
gate access to allow colonization by potentially beneficial, nonpathogenic microbes. …
gate access to allow colonization by potentially beneficial, nonpathogenic microbes. …
[HTML][HTML] Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
Microbial communities are critical to ecosystem function. A key objective of metagenomic
studies is to analyse organism-specific metabolic pathways and reconstruct community …
studies is to analyse organism-specific metabolic pathways and reconstruct community …
[HTML][HTML] Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
…, DS Lundberg, TG Del Rio, SG Tringe… - Nature …, 2016 - nature.com
Bacteria living on and in leaves and roots influence many aspects of plant health, so the
extent of a plant’s genetic control over its microbiota is of great interest to crop breeders and …
extent of a plant’s genetic control over its microbiota is of great interest to crop breeders and …
Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
Desert plants are hypothesized to survive the environmental stress inherent to these regions
in part thanks to symbioses with microorganisms, and yet these microbial species, the …
in part thanks to symbioses with microorganisms, and yet these microbial species, the …
A renaissance for the pioneering 16S rRNA gene
SG Tringe, P Hugenholtz - Current opinion in microbiology, 2008 - Elsevier
Culture-independent molecular surveys using the 16S rRNA gene have become a mainstay
for characterizing microbial community structure over the past quarter century. More recently …
for characterizing microbial community structure over the past quarter century. More recently …