User profiles for A. Reidenbach

Andrew Reidenbach

Research Scientist, Broad Institute of MIT and Harvard
Verified email at broadinstitute.org
Cited by 867

Machine learning on DNA-encoded library count data using an uncertainty-aware probabilistic loss function

KS Lim, AG Reidenbach, BK Hua… - Journal of chemical …, 2022 - ACS Publications
DNA-encoded library (DEL) screening and quantitative structure–activity relationship (QSAR)
modeling are two techniques used in drug discovery to find novel small molecules that …

[PDF][PDF] Mitochondrial ADCK3 employs an atypical protein kinase-like fold to enable coenzyme Q biosynthesis

JA Stefely, AG Reidenbach, A Ulbrich, K Oruganty… - Molecular cell, 2015 - cell.com
The ancient UbiB protein kinase-like family is involved in isoprenoid lipid biosynthesis and
is implicated in human diseases, but demonstration of UbiB kinase activity has remained …

[PDF][PDF] Cerebellar ataxia and coenzyme Q deficiency through loss of unorthodox kinase activity

JA Stefely, F Licitra, L Laredj, AG Reidenbach… - Molecular cell, 2016 - cell.com
The UbiB protein kinase-like (PKL) family is widespread, comprising one-quarter of microbial
PKLs and five human homologs, yet its biochemical activities remain obscure. COQ8A (…

[HTML][HTML] Antisense oligonucleotides extend survival of prion-infected mice

…, R O'Keefe, LL Lubke, AG Reidenbach… - JCI insight, 2019 - ncbi.nlm.nih.gov
Prion disease is a fatal, incurable neurodegenerative disease of humans and other mammals
caused by conversion of cellular prion protein (PrP C) into a self-propagating neurotoxic …

Helix formation in preorganized β/γ-peptide foldamers: hydrogen-bond analogy to the α-helix without α-amino acid residues

…, AM Almeida, W Zhang, AG Reidenbach… - Journal of the …, 2010 - ACS Publications
We report the first high-resolution structural data for the β/γ-peptide 13-helix (i,i+3 CO···HN
H-bonds), a secondary structure that is formed by oligomers with a 1:1 alternation of β- and …

[PDF][PDF] Conserved lipid and small-molecule modulation of COQ8 reveals regulation of the ancient kinase-like UbiB family

AG Reidenbach, ZA Kemmerer, D Aydin, A Jochem… - Cell chemical …, 2018 - cell.com
Human COQ8A (ADCK3) and Saccharomyces cerevisiae Coq8p (collectively COQ8) are UbiB
family proteins essential for mitochondrial coenzyme Q (CoQ) biosynthesis. However, the …

Evolution of amide stacking in larger γ-peptides: triamide H-bonded cycles

…, LV Slipchenko, L Guo, AG Reidenbach… - The Journal of …, 2011 - ACS Publications
The single-conformation spectroscopy of two model γ-peptides has been studied under jet-cooled
conditions in the gas phase. The methyl-capped triamides, Ac-γ 2 -hPhe-γ 2 -hAla-…

Characteristic Structural Parameters for the γ‐Peptide 14‐Helix: Importance of Subunit Preorganization

L Guo, W Zhang, AG Reidenbach… - Angewandte Chemie …, 2011 - Wiley Online Library
The complexity of structure and function among biopolymers has inspired chemists to
extrapolate to non-natural analogues that are intended to emulate the natural archetypes.[1] b-…

[PDF][PDF] Multi-omic mitoprotease profiling defines a role for Oct1p in coenzyme Q production

MT Veling, AG Reidenbach, EC Freiberger… - Molecular cell, 2017 - cell.com
Mitoproteases are becoming recognized as key regulators of diverse mitochondrial functions,
although their direct substrates are often difficult to discern. Through multi-omic profiling of …

[HTML][HTML] Regional variability and genotypic and pharmacodynamic effects on PrP concentration in the CNS

MA Mortberg, HT Zhao, AG Reidenbach, JE Gentile… - JCI insight, 2022 - ncbi.nlm.nih.gov
Prion protein (PrP) concentration controls the kinetics of prion replication and is a genetically
and pharmacologically validated therapeutic target for prion disease. In order to evaluate …