User profiles for D. C. Ilut
Daniel C IlutInvitae Verified email at cornell.edu Cited by 1625 |
[HTML][HTML] Defining loci in restriction-based reduced representation genomic data from nonmodel species: sources of bias and diagnostics for optimal clustering
Next generation sequencing holds great promise for applications of phylogeography,
landscape genetics, and population genomics in wild populations of nonmodel species, but the …
landscape genetics, and population genomics in wild populations of nonmodel species, but the …
Novel loci underlie natural variation in vitamin E levels in maize grain
Tocopherols, tocotrienols, and plastochromanols (collectively termed tocochromanols) are
lipid-soluble antioxidants synthesized by all plants. Their dietary intake, primarily from seed …
lipid-soluble antioxidants synthesized by all plants. Their dietary intake, primarily from seed …
A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA‐seq in plant species
• Premise of the study: RNA‐seq analysis of plant transcriptomes poses unique challenges
due to the highly duplicated nature of plant genomes. We address these challenges in the …
due to the highly duplicated nature of plant genomes. We address these challenges in the …
A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction
Successful management and utilization of increasingly large genomic datasets is essential
for breeding programs to accelerate cultivar development. To help with this, we developed a …
for breeding programs to accelerate cultivar development. To help with this, we developed a …
Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain
CH Diepenbrock, DC Ilut… - The Plant …, 2021 - academic.oup.com
Vitamin A deficiency remains prevalent in parts of Asia, Latin America, and sub-Saharan
Africa where maize (Zea mays) is a food staple. Extensive natural variation exists for …
Africa where maize (Zea mays) is a food staple. Extensive natural variation exists for …
[HTML][HTML] Floral gene resources from basal angiosperms for comparative genomics research
Background The Floral Genome Project was initiated to bridge the genomic gap between the
most broadly studied plant model systems. Arabidopsis and rice, although now completely …
most broadly studied plant model systems. Arabidopsis and rice, although now completely …
[HTML][HTML] Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium
OP Yurchenko, S Park, DC Ilut, JJ Inmon… - BMC plant biology, 2014 - Springer
Background The majority of commercial cotton varieties planted worldwide are derived from
Gossypium hirsutum, which is a naturally occurring allotetraploid produced by interspecific …
Gossypium hirsutum, which is a naturally occurring allotetraploid produced by interspecific …
Identification of haplotypes at the Rsv4 genomic region in soybean associated with durable resistance to soybean mosaic virus
Key message Discovery of new germplasm sources and identification of haplotypes for the
durable Soybean mosaic virus resistance gene, Rsv 4, provide novel resources for map-…
durable Soybean mosaic virus resistance gene, Rsv 4, provide novel resources for map-…
A century of guayule: Comprehensive genetic characterization of the US national guayule (Parthenium argentatum A. Gray) germplasm collection
The fragility of a single-source, geographically concentrated supply of natural rubber, a critical
material of the modern economy, has brought guayule (Parthenium argentatum A. Gray) …
material of the modern economy, has brought guayule (Parthenium argentatum A. Gray) …
rAmpSeq: Using repetitive sequences for robust genotyping
Repetitive sequences have been used for DNA fingerprinting and genotyping for more than
a quarter century. Now, with our knowledge of whole genome sequences, repetitive …
a quarter century. Now, with our knowledge of whole genome sequences, repetitive …