User profiles for N. T. Johnson

Nathan Johnson

H3 Biomedicine
Verified email at h3biomedicine.com
Cited by 632

[HTML][HTML] Machine learning identifies candidates for drug repurposing in Alzheimer's disease

…, SA Boswell, K Evans, G Zhou, NT Johnson… - Nature …, 2021 - nature.com
Clinical trials of novel therapeutics for Alzheimer’s Disease (AD) have consumed a large
amount of time and resources with largely negative results. Repurposing drugs already …

Targeting immunosuppressive macrophages overcomes PARP inhibitor resistance in BRCA1-associated triple-negative breast cancer

…, JR Lin, KE Hurst, M de Oliveira Taveira, NT Johnson… - Nature cancer, 2021 - nature.com
Despite objective responses to poly(ADP-ribose) polymerase (PARP) inhibition and
improvements in progression-free survival (PFS) compared to standard chemotherapy in patients …

Identifying a hidden conglomerate chiral pool in the CSD

MP Walsh, JA Barclay, CS Begg, J Xuan, NT Johnson… - JACS Au, 2022 - ACS Publications
Conglomerate crystallization is the spontaneous generation of individually enantioenriched
crystals from a nonenantioenriched material. This behavior is responsible for spontaneous …

[HTML][HTML] CSD communications of the Cambridge Structural Database

GM Ferrence, CA Tovee, SJW Holgate, NT Johnson… - IUCrJ, 2023 - scripts.iucr.org
The Cambridge Structural Database (CSD) is a collection of over one million experimental
three-dimensional structures obtained through crystallographic analyses. These structures …

[HTML][HTML] The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes

…, E Lord, PS Juvale, J Schmutz, NT Johnson… - BMC genomics, 2019 - Springer
Background Heterodera glycines, commonly referred to as the soybean cyst nematode (SCN),
is an obligatory and sedentary plant parasite that causes over a billion-dollar yield loss to …

Propylthiouracil-induced hypersensitivity vasculitis presenting as respiratory failure

CPTSJ Stankus, NT Johnson - Chest, 1992 - Elsevier
Hypersensitivity vasculitis associated with propylthiouracil therapy is a well-documented
clinical entity. Although any organ system may be involved, it is most unusual for pulmonary …

Inherent risks associated with manufacture of bioengineered ocular surface tissue

IR Schwab, NT Johnson, DG Harkin - Archives of Ophthalmology, 2006 - jamanetwork.com
Objective To review the potential health risks associated with bioengineered ocular surface
tissue, which serves as a bellwether for other tissues. Methods All clinical trials using …

Integrated methylome and transcriptome analysis reveals novel regulatory elements in pediatric acute lymphoblastic leukemia

…, BT Levinson, AC Van Swaay, NT Johnson… - Epigenetics, 2015 - Taylor & Francis
Acute lymphoblastic leukemia (ALL) is the most common cancer diagnosed in children under
the age of 15. In addition to genetic aberrations, epigenetic modifications such as DNA …

Mind the gap: On bridging the semantic gap between machine learning and malware analysis

MR Smith, NT Johnson, JB Ingram… - Proceedings of the 13th …, 2020 - dl.acm.org
Machine learning (ML) techniques are being used to detect increasing amounts of malware
and variants. Despite successful applications of ML, we hypothesize that the full potential of …

Biological classification with RNA-seq data: Can alternatively spliced transcript expression enhance machine learning classifiers?

NT Johnson, A Dhroso, KJ Hughes, D Korkin - Rna, 2018 - rnajournal.cshlp.org
RNA sequencing (RNA-seq) is becoming a prevalent approach to quantify gene expression
and is expected to gain better insights into a number of biological and biomedical questions …