User profiles for R. Retkute
Renata RetkuteResearch Associate, University of Cambridge Verified email at cam.ac.uk Cited by 2148 |
A modelling framework to assess the likely effectiveness of facemasks in combination with 'lock-down'in managing the COVID-19 pandemic
ROJH Stutt, R Retkute, M Bradley… - … of the Royal …, 2020 - royalsocietypublishing.org
… Given the wide variation in quoted values for COVID-19's R 0 [38], we consider two cases: R
… 0 ) is 4.0, our analyses show that the best reductions in the R e occur when facemasks are …
… 0 ) is 4.0, our analyses show that the best reductions in the R e occur when facemasks are …
A global profile of replicative polymerase usage
… Position of incorporated ribonucleotides is shown as 'r'. … Custom R scripts (available on
request) were used to identify origins: polymerase usage ratio data from each strand (calculated …
request) were used to identify origins: polymerase usage ratio data from each strand (calculated …
[PDF][PDF] Kinetochores coordinate pericentromeric cohesion and early DNA replication by Cdc7-Dbf4 kinase recruitment
Centromeres play several important roles in ensuring proper chromosome segregation. Not
only do they promote kinetochore assembly for microtubule attachment, but they also …
only do they promote kinetochore assembly for microtubule attachment, but they also …
The dynamics of genome replication using deep sequencing
…, M Hawkins, R Retkute, S Malla, R Wilson… - Nucleic acids …, 2014 - academic.oup.com
Eukaryotic genomes are replicated from multiple DNA replication origins. We present
complementary deep sequencing approaches to measure origin location and activity in …
complementary deep sequencing approaches to measure origin location and activity in …
[HTML][HTML] Approximate Bayesian Computation for infectious disease modelling
A Minter, R Retkute - Epidemics, 2019 - Elsevier
… We present a tutorial on coding practice for ABC in R and three case studies to illustrate
the … Within the while loop, we utilise existing R functions to propose values from the prior …
the … Within the while loop, we utilise existing R functions to propose values from the prior …
Exploiting heterogeneous environments: does photosynthetic acclimation optimize carbon gain in fluctuating light?
R Retkute, SE Smith-Unna, RW Smith… - Journal of …, 2015 - academic.oup.com
… The rate of dark respiration R D is known to vary depending on acclimation state, with low-light-acclimated
leaves having lower R D than high-light-acclimated leaves. R D can be …
leaves having lower R D than high-light-acclimated leaves. R D can be …
[HTML][HTML] Exploring relationships between canopy architecture, light distribution, and photosynthesis in contrasting rice genotypes using 3D canopy reconstruction
The arrangement of leaf material is critical in determining the light environment, and
subsequently the photosynthetic productivity of complex crop canopies. However, links between …
subsequently the photosynthetic productivity of complex crop canopies. However, links between …
Mathematical modelling of whole chromosome replication
APS de Moura, R Retkute, M Hawkins… - Nucleic acids …, 2010 - academic.oup.com
All chromosomes must be completely replicated prior to cell division, a requirement that
demands the activation of a sufficient number of appropriately distributed DNA replication origins…
demands the activation of a sufficient number of appropriately distributed DNA replication origins…
[HTML][HTML] Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees
The recent advent of CRISPR and other molecular tools enabled the reconstruction of cell
lineages based on induced DNA mutations and promises to solve the ones of more complex …
lineages based on induced DNA mutations and promises to solve the ones of more complex …
Suboptimal acclimation of photosynthesis to light in wheat canopies
AJ Townsend, R Retkute, K Chinnathambi… - Plant …, 2018 - academic.oup.com
… However, first, improvements must be made for the accurate measurement of R d . This
also would allow for detailed studies on the acclimation of R d to a change in light levels. …
also would allow for detailed studies on the acclimation of R d to a change in light levels. …